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  • Top cofit genes for CSW01_13320 from Vibrio cholerae E7946 ATCC 55056

    fimbrial protein
    SEED: Type IV pilus biogenesis protein PilO
    KEGG: type IV pilus assembly protein PilO

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13250 aspartate aminotransferase family protein no 0.49
    2 CSW01_08415 efflux RND transporter periplasmic adaptor subunit no 0.49
    3 CSW01_04445 hypothetical protein no 0.48
    4 CSW01_02560 chromosome initiation inhibitor no 0.48
    5 CSW01_15840 hypothetical protein no 0.47
    6 CSW01_06610 30S ribosomal protein S5 alanine N-acetyltransferase no 0.46
    7 CSW01_01335 ISAs1 family transposase no 0.45
    8 CSW01_18385 DNA-binding response regulator 0.84 0.44
    9 CSW01_08440 phage shock protein operon transcriptional activator no 0.43
    10 CSW01_07300 lipoate--protein ligase no 0.42
    11 CSW01_18870 transcriptional regulator no 0.41
    12 CSW01_07055 ATP-dependent helicase no 0.41
    13 CSW01_07495 NAD-glutamate dehydrogenase 0.25 0.41
    14 CSW01_05695 class I SAM-dependent methyltransferase 0.61 0.40
    15 CSW01_09800 lipoprotein no 0.40
    16 CSW01_09105 SDR family oxidoreductase no 0.39
    17 CSW01_06870 7-carboxy-7-deazaguanine synthase QueE no 0.39
    18 CSW01_08410 AcrB/AcrD/AcrF family protein no 0.39
    19 CSW01_19620 delta-VPH no 0.39
    20 CSW01_09680 phosphatidate cytidylyltransferase no 0.38

    Or look for negative cofitness