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Cofit
Protein
Homologs
Top cofit genes for CSW01_12945 from
Vibrio cholerae E7946 ATCC 55056
TIGR03899 family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_17555
LacI family transcriptional regulator
no
0.47
2
CSW01
_02770
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase
no
0.47
3
CSW01
_02790
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
no
0.47
4
CSW01
_00025
membrane protein insertion efficiency factor YidD
no
0.47
5
CSW01
_19395
histidine kinase
no
0.46
6
CSW01
_02645
IS3 family transposase
no
0.46
7
CSW01
_18570
glycine C-acetyltransferase
no
0.45
8
CSW01
_03120
ABC transporter ATP-binding protein
no
0.45
9
CSW01
_05890
hypothetical protein
no
0.44
10
CSW01
_08505
trimethylamine-N-oxide reductase TorA
no
0.44
11
CSW01
_14345
ligand-gated channel
no
0.44
12
CSW01
_10420
succinyl-CoA ligase subunit beta
no
0.42
13
CSW01
_07870
ABC transporter ATP-binding protein
no
0.42
14
CSW01
_00730
lysoplasmalogenase
no
0.41
15
CSW01
_07155
spermidine/putrescine ABC transporter permease PotB
no
0.40
16
CSW01
_10545
hypothetical protein
no
0.40
17
CSW01
_10720
DUF2956 domain-containing protein
no
0.40
18
CSW01
_07070
HlyD family secretion protein
no
0.40
19
CSW01
_10125
maf-like protein
no
0.39
20
CSW01
_09725
TauD/TfdA family dioxygenase
no
0.39
Or look for
negative cofitness