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  • Top cofit genes for CSW01_12935 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter permease
    SEED: ABC-type antimicrobial peptide transport system, permease component

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12685 DNA polymerase III subunit chi no 0.66
    2 CSW01_00655 2-haloalkanoic acid dehalogenase no 0.59
    3 CSW01_04215 IS481 family transposase ISVch1 no 0.58
    4 CSW01_06895 diguanylate cyclase no 0.58
    5 CSW01_01490 Fis family transcriptional regulator no 0.57
    6 CSW01_07235 hypothetical protein no 0.56
    7 CSW01_18710 hemin ABC transporter substrate-binding protein 0.54 0.56
    8 CSW01_04080 hypothetical protein no 0.55
    9 CSW01_15095 protease no 0.54
    10 CSW01_00210 DUF3157 domain-containing protein no 0.54
    11 CSW01_08850 hypothetical protein no 0.54
    12 CSW01_16035 DUF645 domain-containing protein no 0.54
    13 CSW01_18730 DUF406 domain-containing protein no 0.54
    14 CSW01_17585 periplasmic nitrate reductase electron transfer subunit no 0.53
    15 CSW01_14900 regulatory protein LuxO no 0.53
    16 CSW01_18240 mechanosensitive ion channel protein no 0.52
    17 CSW01_03480 tRNA (adenosine(37)-N6)-methyltransferase TrmM no 0.52
    18 CSW01_00700 DNA starvation/stationary phase protection protein no 0.52
    19 CSW01_01975 chemotaxis protein CheX no 0.52
    20 CSW01_07640 sigma-54-dependent Fis family transcriptional regulator no 0.52

    Or look for negative cofitness