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  • Top cofit genes for CSW01_12900 from Vibrio cholerae E7946 ATCC 55056

    DUF490 domain-containing protein
    SEED: Uncharacterized protein YtfN
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_07655 ABC transporter ATP-binding protein no 0.63
    2 CSW01_03780 polyphosphate kinase 1 0.59 0.50
    3 CSW01_01920 bacterioferritin no 0.50
    4 CSW01_12260 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD 0.84 0.49
    5 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.77 0.47
    6 CSW01_01840 GTPase HflX 0.72 0.47
    7 CSW01_09905 long-chain-fatty-acid--CoA ligase FadD 0.43 0.47
    8 CSW01_00675 hypothetical protein no 0.45
    9 CSW01_16950 ATP-dependent endonuclease no 0.44
    10 CSW01_06245 L-cystine transporter 0.55 0.44
    11 CSW01_03860 protein translocase subunit SecD 0.47 0.44
    12 CSW01_01570 hypothetical protein no 0.44
    13 CSW01_15195 PTS ascorbate-specific transporter subunit IIA no 0.44
    14 CSW01_19020 ABC transporter no 0.43
    15 CSW01_11830 gamma-glutamylcyclotransferase no 0.43
    16 CSW01_13155 ribonuclease R 0.84 0.43
    17 CSW01_18770 DUF805 domain-containing protein no 0.43
    18 CSW01_08740 acyl-CoA dehydrogenase no 0.43
    19 CSW01_05760 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase 0.79 0.43
    20 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.49 0.43

    Or look for negative cofitness