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  • Top cofit genes for CSW01_12845 from Vibrio cholerae E7946 ATCC 55056

    metalloprotease PmbA
    SEED: TldE protein, part of TldE/TldD proteolytic complex
    KEGG: PmbA protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13295 cell division protein DamX no 0.90
    2 CSW01_02220 metalloprotease TldD 0.97 0.89
    3 CSW01_02130 MSHA biogenesis protein MshN no 0.88
    4 CSW01_02140 type II secretion system F family protein no 0.88
    5 CSW01_11170 flagellin A no 0.88
    6 CSW01_02170 type II secretion system protein 0.53 0.88
    7 CSW01_10665 PAS domain-containing sensor histidine kinase no 0.88
    8 CSW01_02135 MSHA biogenesis protein MshE 0.61 0.88
    9 CSW01_10640 flagellar assembly protein FliH 0.79 0.87
    10 CSW01_11180 flagellar hook-associated protein FlgK 0.75 0.87
    11 CSW01_02180 MSHA biogenesis protein MshQ no 0.87
    12 CSW01_11265 flagellar basal-body protein no 0.87
    13 CSW01_10350 flagellar biosynthesis protein FlhA 0.81 0.86
    14 CSW01_17675 GGDEF domain-containing protein no 0.86
    15 CSW01_10630 flagella biosynthesis chaperone FliJ 0.77 0.86
    16 CSW01_10650 flagellar basal body M-ring protein FliF 0.79 0.86
    17 CSW01_10685 flagellar hook-associated protein 2 no 0.86
    18 CSW01_13165 sel1 repeat family protein no 0.86
    19 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator 0.71 0.85
    20 CSW01_10645 flagellar motor switch protein FliG 0.78 0.85

    Or look for negative cofitness