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  • Top cofit genes for CSW01_12770 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter permease
    SEED: Uncharacterized ABC transporter, permease component YrbE
    KEGG: putative ABC transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00850 multidrug resistance protein 0.66 0.83
    2 CSW01_05630 replication-associated recombination protein A no 0.82
    3 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.67 0.81
    4 CSW01_02830 murein hydrolase activator NlpD 0.82 0.79
    5 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF 1.00 0.78
    6 CSW01_13680 DNA helicase RecG 0.77 0.74
    7 CSW01_01015 DNA helicase II 0.73 0.71
    8 CSW01_11870 DNA repair protein RadA 0.60 0.71
    9 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 0.60 0.70
    10 CSW01_12335 outer membrane protein TolC 0.95 0.69
    11 CSW01_06315 DUF3943 domain-containing protein no 0.66
    12 CSW01_09245 Holliday junction branch migration protein RuvA 0.52 0.65
    13 CSW01_12765 outer membrane lipid asymmetry maintenance protein MlaD 0.99 0.64
    14 CSW01_03180 serine protease 0.32 0.61
    15 CSW01_09605 endopeptidase La 0.58 0.60
    16 CSW01_02890 aspartate kinase 0.63 0.59
    17 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.71 0.59
    18 CSW01_05890 hypothetical protein no 0.59
    19 CSW01_13440 fumarate reductase subunit D no 0.59
    20 CSW01_04570 exodeoxyribonuclease 7 small subunit no 0.58

    Or look for negative cofitness