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  • Top cofit genes for CSW01_12705 from Vibrio cholerae E7946 ATCC 55056

    RNA polymerase-associated protein RapA
    SEED: RNA polymerase associated protein RapA (EC 3.6.1.-)
    KEGG: ATP-dependent helicase HepA

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12130 DUF721 domain-containing protein 0.42 0.67
    2 CSW01_01915 bacterioferritin-associated ferredoxin no 0.67
    3 CSW01_06390 thiol oxidoreductase 0.72 0.65
    4 CSW01_14080 DUF3283 domain-containing protein no 0.64
    5 CSW01_03640 bifunctional chorismate mutase/prephenate dehydrogenase no 0.64
    6 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase 0.67 0.64
    7 CSW01_02455 YggS family pyridoxal phosphate enzyme no 0.64
    8 CSW01_03655 murein transglycosylase 0.60 0.64
    9 CSW01_01750 transporter no 0.63
    10 CSW01_09745 pvcA protein no 0.61
    11 CSW01_00450 SCP2 domain-containing protein 0.72 0.61
    12 CSW01_03700 multi-copper polyphenol oxidoreductase 0.95 0.61
    13 CSW01_06380 GTP cyclohydrolase II no 0.60
    14 CSW01_14990 hypothetical protein no 0.59
    15 CSW01_03650 energy-dependent translational throttle protein EttA 0.84 0.59
    16 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.59
    17 CSW01_13285 ribulose-phosphate 3-epimerase 0.49 0.59
    18 CSW01_03325 porin no 0.59
    19 CSW01_03750 U32 family peptidase 0.44 0.59
    20 CSW01_10630 flagella biosynthesis chaperone FliJ 0.90 0.59

    Or look for negative cofitness