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  • Top cofit genes for CSW01_12700 from Vibrio cholerae E7946 ATCC 55056

    RNA pseudouridine synthase
    SEED: Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase A

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14690 Crp/Fnr family transcriptional regulator no 0.66
    2 CSW01_03760 phosphate regulon transcriptional regulatory protein PhoB no 0.66
    3 CSW01_11240 flagella basal body P-ring formation protein FlgA no 0.65
    4 CSW01_11205 flagellar basal-body rod protein FlgF no 0.65
    5 CSW01_12575 transcriptional regulator LeuO no 0.65
    6 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 0.33 0.65
    7 CSW01_17395 hypothetical protein no 0.64
    8 CSW01_14825 GGDEF domain-containing protein no 0.64
    9 CSW01_00005 hypothetical protein no 0.64
    10 CSW01_06540 metal-dependent phosphohydrolase no 0.63
    11 CSW01_03280 16S rRNA methyltransferase 0.63 0.63
    12 CSW01_15305 XRE family transcriptional regulator no 0.62
    13 CSW01_13165 sel1 repeat family protein no 0.62
    14 CSW01_02060 methionine synthase no 0.62
    15 CSW01_11195 flagellar L-ring protein 0.43 0.61
    16 CSW01_03240 chitobiase no 0.61
    17 CSW01_12595 2-isopropylmalate synthase no 0.61
    18 CSW01_06570 serine transporter no 0.61
    19 CSW01_01750 transporter no 0.60
    20 CSW01_10690 protein FlaG no 0.60

    Or look for negative cofitness