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  • Top cofit genes for CSW01_12610 from Vibrio cholerae E7946 ATCC 55056

    3-isopropylmalate dehydratase small subunit
    SEED: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09180 quinolinate synthase 0.94 0.76
    2 CSW01_00460 twin-arginine translocase subunit TatA 0.52 0.76
    3 CSW01_01875 hypothetical protein no 0.75
    4 CSW01_16690 type II toxin-antitoxin system RelE/ParE family toxin no 0.75
    5 CSW01_09755 cytochrome C no 0.75
    6 CSW01_05925 tryptophan synthase subunit alpha 0.97 0.74
    7 CSW01_00475 cytochrome C biogenesis protein CcsA no 0.74
    8 CSW01_01975 chemotaxis protein CheX no 0.73
    9 CSW01_10690 protein FlaG no 0.73
    10 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.71
    11 CSW01_05960 PHP domain-containing protein no 0.71
    12 CSW01_06395 iron-regulated protein A 0.73 0.71
    13 CSW01_08640 envelope biogenesis factor ElyC no 0.71
    14 CSW01_17095 protein acetyltransferase no 0.70
    15 CSW01_12535 cell division protein ZapA no 0.70
    16 CSW01_00700 DNA starvation/stationary phase protection protein no 0.70
    17 CSW01_16835 catabolite repressor/activator 0.38 0.70
    18 CSW01_12735 RidA family protein 0.96 0.70
    19 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase no 0.70
    20 CSW01_05940 anthranilate phosphoribosyltransferase 0.95 0.69

    Or look for negative cofitness