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  • Top cofit genes for CSW01_12605 from Vibrio cholerae E7946 ATCC 55056

    3-isopropylmalate dehydratase large subunit
    SEED: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_17095 protein acetyltransferase no 0.90
    2 CSW01_01875 hypothetical protein no 0.88
    3 CSW01_07135 chromosome partitioning protein ParA no 0.86
    4 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB 0.93 0.85
    5 CSW01_06400 DUF1513 domain-containing protein 0.84 0.85
    6 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.85
    7 CSW01_11560 riboflavin biosynthesis protein RibD no 0.84
    8 CSW01_01555 ATP-dependent RNA helicase RhlB 0.59 0.84
    9 CSW01_04580 flagellar motor protein MotB no 0.84
    10 CSW01_05730 inosine/guanosine kinase no 0.83
    11 CSW01_12080 recombinase RecF no 0.83
    12 CSW01_10655 flagellar hook-basal body complex protein FliE no 0.83
    13 CSW01_06395 iron-regulated protein A 0.75 0.83
    14 CSW01_06735 methylisocitrate lyase 0.48 0.82
    15 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.72 0.82
    16 CSW01_11210 flagellar hook protein FlgE no 0.82
    17 CSW01_01485 transcriptional regulator 0.54 0.82
    18 CSW01_01980 transcriptional regulator Zur 0.40 0.82
    19 CSW01_11265 flagellar basal-body protein no 0.82
    20 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator no 0.82

    Or look for negative cofitness