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  • Top cofit genes for CSW01_12600 from Vibrio cholerae E7946 ATCC 55056

    3-isopropylmalate dehydrogenase
    SEED: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
    KEGG: 3-isopropylmalate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04010 vibriobactin biosynthesis isochorismate synthase no 0.70
    2 CSW01_15210 L-ascorbate 6-phosphate lactonase no 0.67
    3 CSW01_18800 hypothetical protein no 0.67
    4 CSW01_01975 chemotaxis protein CheX no 0.66
    5 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.66
    6 CSW01_01970 MBL fold metallo-hydrolase no 0.65
    7 CSW01_08400 cystathionine beta-lyase 0.99 0.65
    8 CSW01_02060 methionine synthase 0.98 0.64
    9 CSW01_06380 GTP cyclohydrolase II no 0.64
    10 CSW01_08660 PurR family transcriptional regulator no 0.64
    11 CSW01_14990 hypothetical protein no 0.64
    12 CSW01_09720 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD 0.73 0.63
    13 CSW01_18080 ABC transporter permease no 0.63
    14 CSW01_11225 flagellar basal body rod protein FlgB no 0.63
    15 CSW01_08700 DUF2498 domain-containing protein no 0.63
    16 CSW01_04150 RNA methyltransferase no 0.62
    17 CSW01_17405 efflux RND transporter periplasmic adaptor subunit no 0.62
    18 CSW01_05490 L-threonylcarbamoyladenylate synthase no 0.62
    19 CSW01_02100 RNase E specificity factor CsrD no 0.62
    20 CSW01_11780 exodeoxyribonuclease V subunit beta 0.57 0.62

    Or look for negative cofitness