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  • Top cofit genes for CSW01_12595 from Vibrio cholerae E7946 ATCC 55056

    2-isopropylmalate synthase
    SEED: 2-isopropylmalate synthase (EC 2.3.3.13)
    KEGG: 2-isopropylmalate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 0.98 0.79
    2 CSW01_11555 riboflavin synthase no 0.78
    3 CSW01_12730 aspartate carbamoyltransferase regulatory subunit no 0.77
    4 CSW01_10675 flagellar protein FliS no 0.76
    5 CSW01_01980 transcriptional regulator Zur no 0.76
    6 CSW01_11785 exonuclease V subunit gamma no 0.76
    7 CSW01_05925 tryptophan synthase subunit alpha 0.98 0.75
    8 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.75
    9 CSW01_01975 chemotaxis protein CheX no 0.74
    10 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB 0.91 0.74
    11 CSW01_02200 septum formation inhibitor Maf no 0.74
    12 CSW01_11195 flagellar L-ring protein no 0.74
    13 CSW01_16665 nucleotide pyrophosphohydrolase no 0.74
    14 CSW01_02125 MSHA biogenesis protein MshM 0.70 0.74
    15 CSW01_05130 flagellar protein MotY no 0.73
    16 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator no 0.73
    17 CSW01_02175 MSHA biogenesis protein MshP no 0.73
    18 CSW01_11560 riboflavin biosynthesis protein RibD no 0.73
    19 CSW01_05395 protease SohB no 0.73
    20 CSW01_06020 transporter no 0.73

    Or look for negative cofitness