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  • Top cofit genes for CSW01_12590 from Vibrio cholerae E7946 ATCC 55056

    TetR/AcrR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03480 tRNA (adenosine(37)-N6)-methyltransferase TrmM no 0.65
    2 CSW01_00700 DNA starvation/stationary phase protection protein no 0.65
    3 CSW01_06895 diguanylate cyclase no 0.64
    4 CSW01_03825 malate synthase A 0.38 0.64
    5 CSW01_05215 molybdenum cofactor biosynthesis protein B no 0.64
    6 CSW01_12355 inorganic triphosphatase no 0.62
    7 CSW01_02200 septum formation inhibitor Maf no 0.62
    8 CSW01_17160 TetR/AcrR family transcriptional regulator no 0.61
    9 CSW01_01490 Fis family transcriptional regulator no 0.60
    10 CSW01_10290 cytochrome c biogenesis ATP-binding export protein CcmA no 0.60
    11 CSW01_03625 DNA-binding response regulator no 0.60
    12 CSW01_18665 permease no 0.59
    13 CSW01_18210 cryptochrome/photolyase family protein no 0.59
    14 CSW01_16835 catabolite repressor/activator no 0.57
    15 CSW01_06335 (2Fe-2S)-binding protein no 0.57
    16 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 0.46 0.57
    17 CSW01_00790 vitamin B12 transporter BtuB no 0.56
    18 CSW01_06020 transporter no 0.56
    19 CSW01_02530 D-erythrose-4-phosphate dehydrogenase 0.18 0.56
    20 CSW01_00755 cell division protein FtsX no 0.55

    Or look for negative cofitness