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  • Top cofit genes for CSW01_12575 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator LeuO
    SEED: Probable transcriptional activator for leuABCD operon
    KEGG: LysR family transcriptional regulator, transcriptional activator for leuABCD operon

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04655 HTH-type transcriptional regulator TreR no 0.72
    2 CSW01_12595 2-isopropylmalate synthase 0.45 0.68
    3 CSW01_04010 vibriobactin biosynthesis isochorismate synthase no 0.68
    4 CSW01_10010 hypothetical protein no 0.68
    5 CSW01_10680 flagellar protein FliT no 0.67
    6 CSW01_07900 hypothetical protein 0.22 0.65
    7 CSW01_03655 murein transglycosylase no 0.65
    8 CSW01_12700 RNA pseudouridine synthase no 0.65
    9 CSW01_10690 protein FlaG no 0.65
    10 CSW01_01870 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA no 0.64
    11 CSW01_02130 MSHA biogenesis protein MshN no 0.64
    12 CSW01_12585 phosphatase PAP2 family protein no 0.64
    13 CSW01_10335 RNA polymerase sigma factor FliA 0.52 0.63
    14 CSW01_04580 flagellar motor protein MotB no 0.62
    15 CSW01_11195 flagellar L-ring protein 0.31 0.62
    16 CSW01_03660 trp operon repressor no 0.62
    17 CSW01_18865 spermidine acetyltransferase no 0.62
    18 CSW01_12730 aspartate carbamoyltransferase regulatory subunit no 0.62
    19 CSW01_10685 flagellar hook-associated protein 2 no 0.62
    20 CSW01_16665 nucleotide pyrophosphohydrolase no 0.62

    Or look for negative cofitness