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  • Top cofit genes for CSW01_12415 from Vibrio cholerae E7946 ATCC 55056

    two-component sensor histidine kinase BarA
    SEED: BarA sensory histidine kinase (= VarS = GacS)
    KEGG: two-component system, NarL family, sensor histidine kinase BarA

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00660 sensor domain-containing phosphodiesterase no 0.62
    2 CSW01_07520 RNA chaperone ProQ 0.88 0.62
    3 CSW01_10295 DUF2802 domain-containing protein no 0.59
    4 CSW01_10670 sigma-54-dependent Fis family transcriptional regulator 0.56 0.59
    5 CSW01_10650 flagellar basal body M-ring protein FliF 0.69 0.57
    6 CSW01_10685 flagellar hook-associated protein 2 no 0.57
    7 CSW01_11175 flagellar hook-associated protein 3 no 0.56
    8 CSW01_10680 flagellar protein FliT no 0.56
    9 CSW01_10580 flagellar biosynthesis protein FlhB 0.71 0.56
    10 CSW01_10665 PAS domain-containing sensor histidine kinase no 0.55
    11 CSW01_10690 protein FlaG no 0.55
    12 CSW01_05030 molecular chaperone HtpG 0.46 0.55
    13 CSW01_10645 flagellar motor switch protein FliG 0.73 0.55
    14 CSW01_11180 flagellar hook-associated protein FlgK no 0.54
    15 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator 0.68 0.54
    16 CSW01_11250 molecular chaperone no 0.53
    17 CSW01_10335 RNA polymerase sigma factor FliA 0.72 0.53
    18 CSW01_10350 flagellar biosynthesis protein FlhA 0.70 0.53
    19 CSW01_11170 flagellin A no 0.52
    20 CSW01_10300 chemotaxis protein CheW no 0.52

    Or look for negative cofitness