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  • Top cofit genes for CSW01_12410 from Vibrio cholerae E7946 ATCC 55056

    23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
    SEED: 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)
    KEGG: RNA methyltransferase, TrmA family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11130 hypothetical protein no 0.58
    2 CSW01_00340 thiamine phosphate synthase no 0.57
    3 CSW01_16935 formate transporter FocA no 0.56
    4 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 0.45 0.56
    5 CSW01_12715 ribonuclease 0.23 0.55
    6 CSW01_03755 recombination-associated protein RdgC 0.38 0.54
    7 CSW01_08985 6-phospho-beta-glucosidase no 0.54
    8 CSW01_06200 phosphoribosylglycinamide formyltransferase no 0.53
    9 CSW01_12595 2-isopropylmalate synthase 0.59 0.53
    10 CSW01_13735 3'(2'),5'-bisphosphate nucleotidase CysQ 0.59 0.53
    11 CSW01_01715 NADH pyrophosphatase 0.25 0.53
    12 CSW01_08350 DUF1289 domain-containing protein no 0.52
    13 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP 0.63 0.52
    14 CSW01_09595 peptidylprolyl isomerase 0.75 0.52
    15 CSW01_09180 quinolinate synthase 0.26 0.52
    16 CSW01_06890 ABC transporter substrate-binding protein no 0.52
    17 CSW01_01970 MBL fold metallo-hydrolase no 0.52
    18 CSW01_01865 hypothetical protein no 0.51
    19 CSW01_03660 trp operon repressor no 0.51
    20 CSW01_07725 fructosamine kinase family protein no 0.51

    Or look for negative cofitness