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  • Top cofit genes for CSW01_12335 from Vibrio cholerae E7946 ATCC 55056

    outer membrane protein TolC
    SEED: Type I secretion outer membrane protein, TolC precursor
    KEGG: outer membrane channel protein TolC

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.99 0.84
    2 CSW01_00850 multidrug resistance protein 0.87 0.83
    3 CSW01_02890 aspartate kinase no 0.83
    4 CSW01_05630 replication-associated recombination protein A 0.48 0.81
    5 CSW01_01015 DNA helicase II 0.61 0.81
    6 CSW01_09605 endopeptidase La 0.91 0.78
    7 CSW01_13680 DNA helicase RecG 0.45 0.71
    8 CSW01_12770 ABC transporter permease 0.95 0.69
    9 CSW01_11870 DNA repair protein RadA 0.71 0.68
    10 CSW01_02830 murein hydrolase activator NlpD no 0.68
    11 CSW01_12840 magnesium transporter no 0.68
    12 CSW01_13160 DUF3413 domain-containing protein 0.48 0.67
    13 CSW01_09245 Holliday junction branch migration protein RuvA 0.36 0.66
    14 CSW01_03975 exodeoxyribonuclease VII large subunit no 0.64
    15 CSW01_04650 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase 0.84 0.62
    16 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 0.59 0.61
    17 CSW01_04105 sodium pump decarboxylase no 0.60
    18 CSW01_05890 hypothetical protein no 0.60
    19 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF 0.97 0.59
    20 CSW01_17050 histidine kinase no 0.59

    Or look for negative cofitness