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  • Top cofit genes for CSW01_12240 from Vibrio cholerae E7946 ATCC 55056

    single-stranded-DNA-specific exonuclease RecJ
    SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
    KEGG: single-stranded-DNA-specific exonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_17675 GGDEF domain-containing protein no 0.69
    2 CSW01_02165 MSHA pilin protein MshD no 0.66
    3 CSW01_02170 type II secretion system protein no 0.65
    4 CSW01_02460 type IV pili twitching motility protein PilT 0.32 0.64
    5 CSW01_01010 oligopeptidase A 0.79 0.64
    6 CSW01_10340 MinD/ParA family protein no 0.64
    7 CSW01_02110 MSHA biogenesis protein MshJ no 0.64
    8 CSW01_00180 cytochrome c oxidase accessory protein CcoG no 0.63
    9 CSW01_02130 MSHA biogenesis protein MshN no 0.63
    10 CSW01_12845 metalloprotease PmbA 0.48 0.63
    11 CSW01_12245 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.48 0.62
    12 CSW01_02220 metalloprotease TldD 0.31 0.62
    13 CSW01_01125 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.62 0.61
    14 CSW01_02140 type II secretion system F family protein no 0.61
    15 CSW01_07165 hypothetical protein no 0.61
    16 CSW01_04240 peptidase no 0.59
    17 CSW01_12970 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase 0.55 0.59
    18 CSW01_10345 flagellar biosynthesis protein FlhF no 0.59
    19 CSW01_02120 pilus (MSHA type) biogenesis protein MshL no 0.59
    20 CSW01_02115 MSHA biogenesis protein MshK no 0.59

    Or look for negative cofitness