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  • Top cofit genes for CSW01_12225 from Vibrio cholerae E7946 ATCC 55056

    pyruvate dehydrogenase complex transcriptional repressor PdhR
    SEED: Transcriptional repressor for pyruvate dehydrogenase complex
    KEGG: GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_17610 signal transduction histidine-protein kinase/phosphatase UhpB 0.45 0.53
    2 CSW01_18005 low-specificity L-threonine aldolase 0.21 0.52
    3 CSW01_08375 CDP-alcohol phosphatidyltransferase family protein no 0.51
    4 CSW01_13700 transcription elongation factor GreB 0.25 0.50
    5 CSW01_07615 DUF3306 domain-containing protein no 0.50
    6 CSW01_04625 SecY-interacting protein no 0.49
    7 CSW01_17605 DNA-binding response regulator 0.30 0.45
    8 CSW01_00910 ABC transporter ATP-binding protein no 0.45
    9 CSW01_13510 HslU--HslV peptidase ATPase subunit 0.57 0.44
    10 CSW01_14380 phosphate ABC transporter, permease protein PstA 0.38 0.44
    11 CSW01_05690 DUF1365 domain-containing protein no 0.44
    12 CSW01_05535 histidine kinase no 0.43
    13 CSW01_02570 hypothetical protein no 0.43
    14 CSW01_00420 ferritin no 0.43
    15 CSW01_08720 arginyltransferase 0.64 0.42
    16 CSW01_08325 serine transporter no 0.42
    17 CSW01_05085 hypothetical protein no 0.42
    18 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase 0.70 0.41
    19 CSW01_12030 glutamate synthase large subunit 0.70 0.40
    20 CSW01_17340 23S rRNA methyltransferase 0.41 0.40

    Or look for negative cofitness