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  • Top cofit genes for CSW01_12200 from Vibrio cholerae E7946 ATCC 55056

    ribosomal RNA small subunit methyltransferase H
    SEED: rRNA small subunit methyltransferase H
    KEGG: S-adenosyl-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_02150 MSHA biogenesis protein MshB no 0.80
    2 CSW01_18560 hypothetical protein no 0.78
    3 CSW01_00170 thiol:disulfide interchange protein DsbA 0.64 0.78
    4 CSW01_17275 large conductance mechanosensitive channel protein MscL no 0.76
    5 CSW01_08850 hypothetical protein no 0.75
    6 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase 0.26 0.74
    7 CSW01_11190 flagellar P-ring protein 0.69 0.74
    8 CSW01_02230 ribonuclease E inhibitor RraB no 0.74
    9 CSW01_12885 fructose 1,6-bisphosphatase no 0.73
    10 CSW01_03755 recombination-associated protein RdgC no 0.73
    11 CSW01_03215 ABC transporter ATP-binding protein no 0.73
    12 CSW01_05225 molybdopterin synthase sulfur carrier subunit no 0.73
    13 CSW01_10590 flagellar biosynthetic protein FliQ no 0.73
    14 CSW01_10595 flagellar biosynthetic protein FliP no 0.72
    15 CSW01_05235 GGDEF domain-containing protein no 0.72
    16 CSW01_05950 anthranilate synthase component I no 0.72
    17 CSW01_02160 MSHA pilin protein MshC no 0.72
    18 CSW01_06280 succinylglutamate desuccinylase no 0.71
    19 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.46 0.70
    20 CSW01_01485 transcriptional regulator 0.73 0.70

    Or look for negative cofitness