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  • Top cofit genes for CSW01_12075 from Vibrio cholerae E7946 ATCC 55056

    RNA-directed DNA polymerase
    SEED: Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)
    KEGG: RNA-directed DNA polymerase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10540 NAD(P)H-dependent oxidoreductase no 0.63
    2 CSW01_03880 HTH-type transcriptional regulator IscR no 0.58
    3 CSW01_07800 sn-glycerol-3-phosphate import ATP-binding protein UgpC no 0.56
    4 CSW01_07090 type VI secretion system tube protein Hcp no 0.55
    5 CSW01_02695 DUF2787 domain-containing protein no 0.51
    6 CSW01_08365 ABC transporter permease no 0.50
    7 CSW01_14485 hypothetical protein no 0.50
    8 CSW01_03505 hypothetical protein no 0.50
    9 CSW01_09285 porin no 0.49
    10 CSW01_15925 hypothetical protein no 0.49
    11 CSW01_00140 dihydroxy-acid dehydratase 0.35 0.48
    12 CSW01_04910 PhoH family protein no 0.48
    13 CSW01_09830 XRE family transcriptional regulator no 0.48
    14 CSW01_03845 hypothetical protein no 0.46
    15 CSW01_18530 hypothetical protein no 0.46
    16 CSW01_05650 8-amino-7-oxononanoate synthase no 0.46
    17 CSW01_08470 DUF2927 domain-containing protein no 0.46
    18 CSW01_07955 catalase no 0.45
    19 CSW01_13375 acetylglutamate kinase no 0.45
    20 CSW01_02775 glycerol-3-phosphate acyltransferase no 0.45

    Or look for negative cofitness