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  • Top cofit genes for CSW01_12015 from Vibrio cholerae E7946 ATCC 55056

    TIGR01212 family radical SAM protein
    SEED: COG1242: Predicted Fe-S oxidoreductase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_07620 DUF3305 domain-containing protein no 0.66
    2 CSW01_10765 thioredoxin-dependent thiol peroxidase 0.73 0.63
    3 CSW01_01730 acetyltransferase no 0.59
    4 CSW01_09875 5'-deoxynucleotidase 0.38 0.56
    5 CSW01_02710 chemotaxis protein no 0.55
    6 CSW01_08855 type I restriction endonuclease subunit R no 0.54
    7 CSW01_00205 hemolysin III family protein 0.37 0.54
    8 CSW01_11790 C4-dicarboxylate ABC transporter 0.62 0.53
    9 CSW01_18020 DEAD/DEAH box helicase no 0.53
    10 CSW01_18945 LysR family transcriptional regulator no 0.52
    11 CSW01_18340 HlyC/CorC family transporter 0.24 0.51
    12 CSW01_11310 beta-N-acetylhexosaminidase no 0.50
    13 CSW01_13720 DNA utilization protein GntX no 0.50
    14 CSW01_11155 NAD-dependent DNA ligase no 0.50
    15 CSW01_08995 transcriptional regulator no 0.50
    16 CSW01_19555 response regulator no 0.49
    17 CSW01_14420 peptidase M23 no 0.49
    18 CSW01_09730 hypothetical protein no 0.49
    19 CSW01_14475 cobinamide adenolsyltransferase no 0.49
    20 CSW01_09690 acyl-CoA thioesterase no 0.49

    Or look for negative cofitness