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  • Top cofit genes for CSW01_11950 from Vibrio cholerae E7946 ATCC 55056

    uracil-DNA glycosylase
    SEED: Uracil-DNA glycosylase, family 1
    KEGG: uracil-DNA glycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00955 hypothetical protein no 0.56
    2 CSW01_01065 TonB-dependent siderophore receptor 0.52 0.56
    3 CSW01_01400 HlyC/CorC family transporter no 0.54
    4 CSW01_13605 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL no 0.50
    5 CSW01_09490 hypothetical protein no 0.49
    6 CSW01_03170 ATP-dependent helicase HrpB 0.43 0.48
    7 CSW01_01365 MBL fold hydrolase 0.14 0.47
    8 CSW01_13310 type IV pilus secretin PilQ 0.28 0.47
    9 CSW01_03120 ABC transporter ATP-binding protein 0.23 0.47
    10 CSW01_13385 acetylornithine deacetylase 0.53 0.46
    11 CSW01_17755 cytochrome B no 0.46
    12 CSW01_02945 oxaloacetate decarboxylase subunit alpha no 0.46
    13 CSW01_02720 AraC family transcriptional regulator no 0.46
    14 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO 0.45 0.45
    15 CSW01_04435 hypothetical protein no 0.44
    16 CSW01_13695 two-component system response regulator OmpR 0.66 0.44
    17 CSW01_08835 helicase no 0.44
    18 CSW01_02965 insulinase family protein 0.28 0.44
    19 CSW01_01525 3'-5' exonuclease no 0.44
    20 CSW01_11280 TonB-dependent siderophore receptor no 0.44

    Or look for negative cofitness