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  • Top cofit genes for CSW01_11930 from Vibrio cholerae E7946 ATCC 55056

    peroxide stress protein YaaA
    SEED: UPF0246 protein YaaA
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06530 aromatic amino acid aminotransferase no 0.61
    2 CSW01_14505 nicotinate phosphoribosyltransferase 0.81 0.56
    3 CSW01_02165 MSHA pilin protein MshD no 0.54
    4 CSW01_06875 7-cyano-7-deazaguanine synthase QueC 0.32 0.53
    5 CSW01_01010 oligopeptidase A 0.85 0.53
    6 CSW01_02460 type IV pili twitching motility protein PilT 0.20 0.52
    7 CSW01_10295 DUF2802 domain-containing protein no 0.52
    8 CSW01_18750 methyl-accepting chemotaxis protein 0.34 0.51
    9 CSW01_12245 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.54 0.50
    10 CSW01_16030 DUF3709 domain-containing protein no 0.50
    11 CSW01_04280 toxin coregulated pilus biosynthesis outer membrane protein C 0.32 0.50
    12 CSW01_00730 lysoplasmalogenase no 0.50
    13 CSW01_02205 ribonuclease E/G 0.48 0.49
    14 CSW01_09065 GTPase no 0.49
    15 CSW01_05390 YciK family oxidoreductase no 0.49
    16 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ 0.76 0.49
    17 CSW01_10420 succinyl-CoA ligase subunit beta 0.31 0.48
    18 CSW01_05615 tRNA dihydrouridine(16) synthase DusC no 0.48
    19 CSW01_09310 methyl-accepting chemotaxis protein no 0.48
    20 CSW01_02220 metalloprotease TldD 0.48 0.47

    Or look for negative cofitness