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  • Top cofit genes for CSW01_11870 from Vibrio cholerae E7946 ATCC 55056

    DNA repair protein RadA
    SEED: DNA repair protein RadA
    KEGG: DNA repair protein RadA/Sms

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09245 Holliday junction branch migration protein RuvA 0.65 0.82
    2 CSW01_02830 murein hydrolase activator NlpD 0.38 0.81
    3 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 0.54 0.80
    4 CSW01_01530 cyclic nucleotide-binding protein no 0.80
    5 CSW01_04570 exodeoxyribonuclease 7 small subunit 0.60 0.79
    6 CSW01_03175 penicillin-binding protein 1B 0.67 0.78
    7 CSW01_05630 replication-associated recombination protein A 0.94 0.78
    8 CSW01_01015 DNA helicase II 0.91 0.78
    9 CSW01_13680 DNA helicase RecG 0.84 0.77
    10 CSW01_12950 adenylyl-sulfate kinase 0.45 0.77
    11 CSW01_09605 endopeptidase La 0.65 0.77
    12 CSW01_02255 C4-dicarboxylate ABC transporter substrate-binding protein no 0.76
    13 CSW01_04650 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase 0.39 0.76
    14 CSW01_13410 protein-export protein SecB 0.51 0.75
    15 CSW01_03975 exodeoxyribonuclease VII large subunit 0.82 0.74
    16 CSW01_10355 phosphohistidine phosphatase SixA no 0.74
    17 CSW01_02890 aspartate kinase 0.34 0.73
    18 CSW01_01190 glycosyltransferase family 2 protein 0.47 0.72
    19 CSW01_01185 ADP-heptose--LPS heptosyltransferase no 0.72
    20 CSW01_02275 arginine:ornithine antiporter 0.20 0.72

    Or look for negative cofitness