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  • Top cofit genes for CSW01_11840 from Vibrio cholerae E7946 ATCC 55056

    DNA-binding transcriptional regulator GalS
    SEED: Galactose operon repressor, GalR-LacI family of transcriptional regulators
    KEGG: LacI family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_08790 mechanosensitive ion channel protein MscS no 0.50
    2 CSW01_18945 LysR family transcriptional regulator no 0.49
    3 CSW01_18125 integrase no 0.49
    4 CSW01_00075 transcription elongation factor GreAB no 0.49
    5 CSW01_15055 Bcr/CflA family drug resistance efflux transporter no 0.47
    6 CSW01_07035 chemotaxis protein CheW no 0.47
    7 CSW01_07865 ABC transporter permease no 0.43
    8 CSW01_11700 hypothetical protein no 0.42
    9 CSW01_18065 allophanate hydrolase 0.49 0.42
    10 CSW01_17760 DNA helicase IV 0.79 0.42
    11 CSW01_08120 M48 family peptidase 0.59 0.41
    12 CSW01_06865 Cof-type HAD-IIB family hydrolase no 0.41
    13 CSW01_18880 hypothetical protein 0.40 0.39
    14 CSW01_00535 thiosulfate sulfurtransferase no 0.39
    15 CSW01_07190 transcriptional regulator FNR no 0.39
    16 CSW01_14880 DsbA family protein no 0.38
    17 CSW01_15030 hypothetical protein no 0.38
    18 CSW01_06650 DUF535 domain-containing protein 0.68 0.38
    19 CSW01_10465 DUF1853 domain-containing protein no 0.38
    20 CSW01_05140 lactoylglutathione lyase no 0.38

    Or look for negative cofitness