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  • Top cofit genes for CSW01_11795 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04465 hypothetical protein no 0.68
    2 CSW01_08665 DNA transformation protein no 0.61
    3 CSW01_09855 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase no 0.61
    4 CSW01_13360 argininosuccinate lyase 0.47 0.60
    5 CSW01_13720 DNA utilization protein GntX no 0.60
    6 CSW01_15915 restriction endonuclease no 0.59
    7 CSW01_01190 glycosyltransferase family 2 protein no 0.59
    8 CSW01_11285 Fe3+-citrate ABC transporter substrate-binding protein no 0.59
    9 CSW01_11580 sigma factor-binding protein Crl 0.74 0.58
    10 CSW01_01255 acyltransferase no 0.57
    11 CSW01_10770 methyl-accepting chemotaxis protein no 0.57
    12 CSW01_01260 polysaccharide deacetylase no 0.57
    13 CSW01_11270 non-ribosomal peptide synthetase no 0.56
    14 CSW01_02735 integrase no 0.56
    15 CSW01_08190 ABC transporter permease no 0.56
    16 CSW01_10760 glycine cleavage system transcriptional regulator 0.86 0.56
    17 CSW01_01250 polymerase no 0.56
    18 CSW01_01185 ADP-heptose--LPS heptosyltransferase no 0.55
    19 CSW01_07960 DUF417 domain-containing protein no 0.55
    20 CSW01_13695 two-component system response regulator OmpR 0.78 0.55

    Or look for negative cofitness