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  • Top cofit genes for CSW01_11690 from Vibrio cholerae E7946 ATCC 55056

    hypothetical protein
    SEED: Hypothetical lipoprotein YajG precursor
    KEGG: uncharacterized lipoprotein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11755 murein transglycosylase 0.67 0.82
    2 CSW01_02890 aspartate kinase no 0.76
    3 CSW01_01355 UDP-glucose 4-epimerase no 0.76
    4 CSW01_01215 capsular biosynthesis protein 0.27 0.74
    5 CSW01_17090 SPOR domain-containing protein no 0.74
    6 CSW01_11535 thiamine-phosphate kinase no 0.74
    7 CSW01_13410 protein-export protein SecB no 0.73
    8 CSW01_13620 aspartate ammonia-lyase no 0.71
    9 CSW01_11440 ribonuclease HII no 0.70
    10 CSW01_04660 PTS trehalose transporter subunit IIBC no 0.69
    11 CSW01_05430 GGDEF domain-containing protein no 0.69
    12 CSW01_03175 penicillin-binding protein 1B 0.48 0.69
    13 CSW01_03155 RNA polymerase-binding transcription factor DksA no 0.68
    14 CSW01_10190 nucleoid-associated protein no 0.68
    15 CSW01_01300 sugar ABC transporter 0.43 0.67
    16 CSW01_13980 LysR family transcriptional regulator 0.54 0.66
    17 CSW01_13605 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL no 0.66
    18 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase no 0.66
    19 CSW01_10355 phosphohistidine phosphatase SixA 0.36 0.66
    20 CSW01_11705 MFS transporter 0.86 0.65

    Or look for negative cofitness