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  • Top cofit genes for CSW01_11605 from Vibrio cholerae E7946 ATCC 55056

    ATP-dependent zinc protease
    SEED: hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05290 cob(I)yrinic acid a,c-diamide adenosyltransferase no 0.61
    2 CSW01_02680 WYL domain-containing protein no 0.61
    3 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF no 0.59
    4 CSW01_15860 DUF645 domain-containing protein no 0.56
    5 CSW01_15060 hypothetical protein no 0.55
    6 CSW01_15430 hypothetical protein no 0.54
    7 CSW01_07805 DeoR/GlpR transcriptional regulator no 0.52
    8 CSW01_14895 mechanosensitive ion channel family protein no 0.52
    9 CSW01_08750 1-aminocyclopropane-1-carboxylate deaminase no 0.49
    10 CSW01_10795 NAD(P)H:quinone oxidoreductase no 0.48
    11 CSW01_17355 D-3-phosphoglycerate dehydrogenase no 0.48
    12 CSW01_14050 ribosomal RNA small subunit methyltransferase G 0.64 0.46
    13 CSW01_04725 sugar transporter no 0.46
    14 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC no 0.46
    15 CSW01_18190 exoribonuclease 2 no 0.45
    16 CSW01_11955 endonuclease no 0.45
    17 CSW01_16395 type II toxin-antitoxin system RelE/ParE family toxin no 0.44
    18 CSW01_08650 molecular chaperone TorD no 0.44
    19 CSW01_08875 SAM-dependent DNA methyltransferase no 0.43
    20 CSW01_10365 VOC family protein no 0.43

    Or look for negative cofitness