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  • Top cofit genes for CSW01_11565 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator NrdR
    SEED: Ribonucleotide reductase transcriptional regulator NrdR
    KEGG: transcriptional repressor NrdR

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12940 DUF3299 domain-containing protein 0.40 0.55
    2 CSW01_16840 exonuclease sbcCD subunit D no 0.54
    3 CSW01_15110 iron(III) ABC transporter substrate-binding protein 0.78 0.53
    4 CSW01_02320 Co2+/Mg2+ efflux protein ApaG 0.57 0.52
    5 CSW01_18275 diaminobutyrate--2-oxoglutarate transaminase no 0.50
    6 CSW01_19025 LysR family transcriptional regulator no 0.49
    7 CSW01_19290 amino acid ABC transporter permease no 0.49
    8 CSW01_04025 Fe2+-enterobactin ABC transporter substrate-binding protein 0.67 0.49
    9 CSW01_18360 hypothetical protein no 0.48
    10 CSW01_19235 glycogen debranching enzyme GlgX 0.38 0.48
    11 CSW01_10025 pyruvate kinase 0.62 0.47
    12 CSW01_12955 sulfate adenylyltransferase 0.92 0.47
    13 CSW01_19080 alkene reductase no 0.46
    14 CSW01_02520 iron-regulated virulence regulatory protein IrgB no 0.46
    15 CSW01_17380 LysR family transcriptional regulator 0.28 0.46
    16 CSW01_05110 bacteriocin production protein 0.53 0.46
    17 CSW01_06955 hypothetical protein no 0.45
    18 CSW01_15115 iron(III) ABC transporter permease 0.72 0.45
    19 CSW01_06010 DUF3392 domain-containing protein no 0.45
    20 CSW01_19510 anti-sigma factor antagonist 0.29 0.45

    Or look for negative cofitness