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  • Top cofit genes for CSW01_11400 from Vibrio cholerae E7946 ATCC 55056

    lytic transglycosylase
    SEED: Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)
    KEGG: membrane-bound lytic murein transglycosylase D

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06740 2-methylcitrate synthase no 0.62
    2 CSW01_14435 MFS transporter no 0.61
    3 CSW01_06925 hypothetical protein no 0.60
    4 CSW01_18020 DEAD/DEAH box helicase no 0.59
    5 CSW01_06945 hypothetical protein no 0.59
    6 CSW01_12385 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase no 0.59
    7 CSW01_13210 TIGR02444 family protein no 0.59
    8 CSW01_19325 MltR family transcriptional regulator 0.81 0.58
    9 CSW01_11270 non-ribosomal peptide synthetase no 0.58
    10 CSW01_10725 hypothetical protein no 0.57
    11 CSW01_02275 arginine:ornithine antiporter 0.24 0.56
    12 CSW01_19275 amino acid ABC transporter ATP-binding protein no 0.56
    13 CSW01_11275 NADPH-dependent ferric siderophore reductase 0.50 0.55
    14 CSW01_05590 DNA-binding protein VF530 no 0.55
    15 CSW01_05465 CPBP family intramembrane metalloprotease no 0.55
    16 CSW01_06855 amino acid ABC transporter substrate-binding protein 0.34 0.55
    17 CSW01_04935 phosphocarrier protein HPr no 0.55
    18 CSW01_03470 peptide chain release factor 3 0.52 0.54
    19 CSW01_18205 dehydratase no 0.54
    20 CSW01_10085 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.71 0.54

    Or look for negative cofitness