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  • Top cofit genes for CSW01_11340 from Vibrio cholerae E7946 ATCC 55056

    GGDEF domain-containing protein
    SEED: GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12095 hypothetical protein no 0.52
    2 CSW01_00735 DUF1145 domain-containing protein no 0.46
    3 CSW01_17340 23S rRNA methyltransferase no 0.46
    4 CSW01_06795 two-component system response regulator no 0.45
    5 CSW01_11835 tRNA-binding protein no 0.44
    6 CSW01_00690 homoserine/homoserine lactone efflux protein no 0.44
    7 CSW01_19300 polymer-forming cytoskeletal family protein no 0.43
    8 CSW01_09055 DUF2787 domain-containing protein no 0.43
    9 CSW01_10820 bifunctional UDP-sugar hydrolase/5'-nucleotidase no 0.43
    10 CSW01_11390 class I SAM-dependent methyltransferase no 0.42
    11 CSW01_04275 toxin coregulated pilus biosynthesis protein Q no 0.42
    12 CSW01_09175 YecA family protein no 0.42
    13 CSW01_05520 two-component sensor histidine kinase no 0.42
    14 CSW01_19070 LysR family transcriptional regulator no 0.42
    15 CSW01_19385 tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY no 0.41
    16 CSW01_08595 insulinase family protein no 0.41
    17 CSW01_00575 class I SAM-dependent methyltransferase no 0.40
    18 CSW01_11680 protein BolA no 0.40
    19 CSW01_18550 non-hemolytic enterotoxin lytic component L1 no 0.40
    20 CSW01_12325 dehydrogenase no 0.39

    Or look for negative cofitness