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Cofit
Protein
Homologs
Top cofit genes for CSW01_11340 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
SEED: GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_12095
hypothetical protein
no
0.52
2
CSW01
_00735
DUF1145 domain-containing protein
no
0.46
3
CSW01
_17340
23S rRNA methyltransferase
no
0.46
4
CSW01
_06795
two-component system response regulator
no
0.45
5
CSW01
_11835
tRNA-binding protein
no
0.44
6
CSW01
_00690
homoserine/homoserine lactone efflux protein
no
0.44
7
CSW01
_19300
polymer-forming cytoskeletal family protein
no
0.43
8
CSW01
_09055
DUF2787 domain-containing protein
no
0.43
9
CSW01
_10820
bifunctional UDP-sugar hydrolase/5'-nucleotidase
no
0.43
10
CSW01
_11390
class I SAM-dependent methyltransferase
no
0.42
11
CSW01
_04275
toxin coregulated pilus biosynthesis protein Q
no
0.42
12
CSW01
_09175
YecA family protein
no
0.42
13
CSW01
_05520
two-component sensor histidine kinase
no
0.42
14
CSW01
_19070
LysR family transcriptional regulator
no
0.42
15
CSW01
_19385
tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY
no
0.41
16
CSW01
_08595
insulinase family protein
no
0.41
17
CSW01
_00575
class I SAM-dependent methyltransferase
no
0.40
18
CSW01
_11680
protein BolA
no
0.40
19
CSW01
_18550
non-hemolytic enterotoxin lytic component L1
no
0.40
20
CSW01
_12325
dehydrogenase
no
0.39
Or look for
negative cofitness