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Cofit
Protein
Homologs
Top cofit genes for CSW01_11260 from
Vibrio cholerae E7946 ATCC 55056
hypothetical protein
SEED: Flagellar protein FlgO
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_11255
flagellar biosynthesis protein FlgP
0.78
0.66
2
CSW01
_02525
iron-regulated outer membrane virulence protein
no
0.65
3
CSW01
_01125
lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
no
0.64
4
CSW01
_11775
exodeoxyribonuclease V subunit alpha
no
0.60
5
CSW01
_00650
tyrosine recombinase XerC
no
0.59
6
CSW01
_10340
MinD/ParA family protein
no
0.58
7
CSW01
_05120
sodium:proton antiporter
no
0.58
8
CSW01
_12240
single-stranded-DNA-specific exonuclease RecJ
no
0.56
9
CSW01
_12245
bifunctional protein-disulfide isomerase/oxidoreductase DsbC
no
0.56
10
CSW01
_06140
excinuclease ABC subunit C
no
0.55
11
CSW01
_04845
D-alanyl-D-alanine carboxypeptidase
no
0.55
12
CSW01
_00260
5-(carboxyamino)imidazole ribonucleotide synthase
no
0.55
13
CSW01
_07780
DUF3450 domain-containing protein
no
0.54
14
CSW01
_08620
chromosome partition protein MukB
no
0.54
15
CSW01
_10345
flagellar biosynthesis protein FlhF
0.74
0.53
16
CSW01
_12250
site-specific tyrosine recombinase XerD
no
0.53
17
CSW01
_02875
DNA recombination/repair protein RecA
no
0.52
18
CSW01
_09525
DNA translocase FtsK
no
0.51
19
CSW01
_05185
excinuclease ABC subunit UvrB
no
0.51
20
CSW01
_05070
N-acetylglucosamine-6-phosphate deacetylase
no
0.50
Or look for
negative cofitness