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Cofit
Protein
Homologs
Top cofit genes for CSW01_11165 from
Vibrio cholerae E7946 ATCC 55056
integrase
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_00175
serine/threonine protein kinase
no
0.66
2
CSW01
_17050
histidine kinase
no
0.64
3
CSW01
_11825
zinc transporter ZntB
no
0.62
4
CSW01
_16025
hypothetical protein
no
0.61
5
CSW01
_11405
EEP domain-containing protein
0.69
0.60
6
CSW01
_19415
hypothetical protein
no
0.59
7
CSW01
_09555
tRNA-(ms[2]io[6]A)-hydroxylase
0.66
0.58
8
CSW01
_10325
protein phosphatase CheZ
no
0.58
9
CSW01
_15230
glycosyl hydrolase
no
0.58
10
CSW01
_07075
MFS transporter
0.36
0.56
11
CSW01
_11300
copper-exporting P-type ATPase A
0.35
0.56
12
CSW01
_06505
glucan biosynthesis protein H
no
0.56
13
CSW01
_10770
methyl-accepting chemotaxis protein
no
0.56
14
CSW01
_15345
XRE family transcriptional regulator
no
0.55
15
CSW01
_02835
RNA polymerase sigma factor RpoS
no
0.55
16
CSW01
_08515
trimethylamine N-oxide reductase system protein TorE
no
0.54
17
CSW01
_06725
tripartite tricarboxylate transporter substrate-binding protein
no
0.54
18
CSW01
_09860
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase
no
0.54
19
CSW01
_11695
peptidyl-prolyl cis-trans isomerase
no
0.54
20
CSW01
_15265
N-acetyltransferase
no
0.54
Or look for
negative cofitness