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  • Top cofit genes for CSW01_11090 from Vibrio cholerae E7946 ATCC 55056

    XRE family transcriptional regulator
    SEED: Phage DNA-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00380 hypothetical protein no 0.63
    2 CSW01_18080 ABC transporter permease no 0.60
    3 CSW01_04495 hypothetical protein no 0.56
    4 CSW01_09115 sigma-54-dependent Fis family transcriptional regulator no 0.55
    5 CSW01_18845 maltose ABC transporter permease no 0.52
    6 CSW01_12120 8-oxo-dGTP diphosphatase MutT no 0.52
    7 CSW01_17240 2-aminoethylphosphonate--pyruvate aminotransferase no 0.52
    8 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit no 0.52
    9 CSW01_00600 heme biosynthesis operon protein HemX no 0.52
    10 CSW01_15340 serine hydroxymethyltransferase no 0.51
    11 CSW01_05610 sensor domain-containing diguanylate cyclase no 0.51
    12 CSW01_09745 pvcA protein no 0.50
    13 CSW01_06215 phosphoribosylglycinamide formyltransferase 2 no 0.50
    14 CSW01_08575 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase no 0.50
    15 CSW01_09720 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD no 0.49
    16 CSW01_17405 efflux RND transporter periplasmic adaptor subunit no 0.49
    17 CSW01_10285 heme exporter protein CcmB no 0.48
    18 CSW01_05845 HDOD domain-containing protein no 0.48
    19 CSW01_12605 3-isopropylmalate dehydratase large subunit no 0.48
    20 CSW01_16855 CAI-1 autoinducer synthase no 0.48

    Or look for negative cofitness