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  • Top cofit genes for CSW01_10535 from Vibrio cholerae E7946 ATCC 55056

    bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
    SEED: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10135 hypothetical protein no 0.79
    2 CSW01_04020 vibriobactin biosynthesis amide synthase VibH no 0.77
    3 CSW01_08190 ABC transporter permease 0.43 0.76
    4 CSW01_01250 polymerase no 0.76
    5 CSW01_00215 potassium uptake protein TrkH 0.59 0.76
    6 CSW01_01275 phosphomannomutase/phosphoglucomutase 0.73 0.76
    7 CSW01_01315 NAD-dependent alcohol dehydrogenase no 0.75
    8 CSW01_01345 glycosyl transferase family 1 no 0.75
    9 CSW01_01185 ADP-heptose--LPS heptosyltransferase no 0.75
    10 CSW01_01285 perosamine synthetase no 0.75
    11 CSW01_01325 acetyltransferase no 0.75
    12 CSW01_01295 ABC transporter permease no 0.75
    13 CSW01_01280 GDP-mannose 4,6-dehydratase 0.40 0.75
    14 CSW01_01305 acyl carrier protein no 0.75
    15 CSW01_01310 long-chain fatty acid--CoA ligase no 0.75
    16 CSW01_01290 rfbG protein no 0.75
    17 CSW01_01320 acyl-CoA reductase no 0.75
    18 CSW01_01360 sugar transferase no 0.75
    19 CSW01_01350 polysaccharide biosynthesis protein no 0.74
    20 CSW01_01255 acyltransferase no 0.74

    Or look for negative cofitness