Top cofit genes for CSW01_10335 from Vibrio cholerae E7946 ATCC 55056

RNA polymerase sigma factor FliA
SEED: RNA polymerase sigma factor for flagellar operon
KEGG: RNA polymerase sigma factor for flagellar operon FliA

Rank	Hit	Name	Description	Conserved?	Cofitness
1	CSW01_10685		flagellar hook-associated protein 2	no	0.92
2	CSW01_10620		flagellar hook-length control protein FliK	no	0.91
3	CSW01_11170		flagellin A	0.68	0.89
4	CSW01_11210		flagellar hook protein FlgE	0.99	0.89
5	CSW01_10660		sigma-54-dependent Fis family transcriptional regulator	0.95	0.88
6	CSW01_10665		PAS domain-containing sensor histidine kinase	0.96	0.88
7	CSW01_11180		flagellar hook-associated protein FlgK	0.97	0.88
8	CSW01_11265		flagellar basal-body protein	0.98	0.87
9	CSW01_02110		MSHA biogenesis protein MshJ	no	0.87
10	CSW01_10675		flagellar protein FliS	0.97	0.87
11	CSW01_04580		flagellar motor protein MotB	0.98	0.87
12	CSW01_02180		MSHA biogenesis protein MshQ	no	0.87
13	CSW01_05130		flagellar protein MotY	0.99	0.86
14	CSW01_10640		flagellar assembly protein FliH	0.96	0.86
15	CSW01_10580		flagellar biosynthesis protein FlhB	0.98	0.86
16	CSW01_10680		flagellar protein FliT	no	0.86
17	CSW01_02170		type II secretion system protein	no	0.86
18	CSW01_04575		flagellar motor protein PomA	0.98	0.86
19	CSW01_02120		pilus (MSHA type) biogenesis protein MshL	no	0.86
20	CSW01_13165		sel1 repeat family protein	0.99	0.85

Or look for negative cofitness