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  • Top cofit genes for CSW01_10130 from Vibrio cholerae E7946 ATCC 55056

    23S rRNA pseudouridine(955/2504/2580) synthase RluC
    SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase C

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11550 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II no 0.56
    2 CSW01_13815 AsmA family protein no 0.55
    3 CSW01_11155 NAD-dependent DNA ligase 0.62 0.51
    4 CSW01_10465 DUF1853 domain-containing protein no 0.51
    5 CSW01_08125 glutaredoxin family protein no 0.51
    6 CSW01_06905 GGDEF domain-containing protein no 0.49
    7 CSW01_07560 DUF4442 domain-containing protein no 0.49
    8 CSW01_12420 sensor domain-containing diguanylate cyclase no 0.48
    9 CSW01_05055 asparagine synthase B 0.86 0.48
    10 CSW01_04980 NfeD family protein no 0.47
    11 CSW01_02960 DedA family protein no 0.47
    12 CSW01_05890 hypothetical protein no 0.47
    13 CSW01_09260 peptidylprolyl isomerase 0.59 0.47
    14 CSW01_02645 IS3 family transposase no 0.47
    15 CSW01_10730 ArsC family reductase 0.66 0.46
    16 CSW01_10510 DUF4442 domain-containing protein no 0.46
    17 CSW01_13680 DNA helicase RecG 0.76 0.44
    18 CSW01_08550 hypothetical protein no 0.44
    19 CSW01_03260 ABC transporter permease no 0.44
    20 CSW01_05325 acetyl-CoA C-acyltransferase FadI 0.43 0.43

    Or look for negative cofitness