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  • Top cofit genes for CSW01_09900 from Vibrio cholerae E7946 ATCC 55056

    ribonuclease D
    SEED: Ribonuclease D (EC 3.1.26.3)
    KEGG: ribonuclease D

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04510 50S ribosomal protein L31 type B no 0.67
    2 CSW01_02620 inovirus Gp2 family protein no 0.63
    3 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.40 0.60
    4 CSW01_01710 Rsd/AlgQ family anti-sigma factor 0.85 0.60
    5 CSW01_17295 molybdopterin molybdotransferase no 0.59
    6 CSW01_09965 DUF2989 domain-containing protein no 0.58
    7 CSW01_06650 DUF535 domain-containing protein no 0.58
    8 CSW01_01480 phosphogluconate dehydratase 0.28 0.58
    9 CSW01_05820 alcohol dehydrogenase no 0.57
    10 CSW01_06090 formimidoylglutamase no 0.57
    11 CSW01_17480 LacI family transcriptional regulator no 0.56
    12 CSW01_14820 hypothetical protein 0.22 0.55
    13 CSW01_00980 hypothetical protein no 0.54
    14 CSW01_02835 RNA polymerase sigma factor RpoS 0.80 0.54
    15 CSW01_17225 putative 2-aminoethylphosphonate ABC transporter permease subunit no 0.54
    16 CSW01_13825 D-aminoacyl-tRNA deacylase 0.41 0.54
    17 CSW01_17825 hypothetical protein no 0.54
    18 CSW01_02940 oxaloacetate decarboxylase subunit gamma no 0.53
    19 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 0.59 0.53
    20 CSW01_18995 hypothetical protein no 0.53

    Or look for negative cofitness