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  • Top cofit genes for CSW01_09830 from Vibrio cholerae E7946 ATCC 55056

    XRE family transcriptional regulator
    SEED: Transcriptional regulator yidN, Cro/CI family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_02715 transcriptional antiterminator no 0.72
    2 CSW01_03970 DNA ligase no 0.66
    3 CSW01_11745 cysteine desulfurase sulfur acceptor subunit CsdE no 0.66
    4 CSW01_10170 MarC family protein 0.23 0.65
    5 CSW01_16665 nucleotide pyrophosphohydrolase no 0.62
    6 CSW01_00110 hypothetical protein no 0.58
    7 CSW01_08730 phage-shock protein no 0.58
    8 CSW01_15605 type II toxin-antitoxin system YafQ family toxin no 0.58
    9 CSW01_00410 universal stress protein UspA 0.61 0.57
    10 CSW01_07955 catalase 0.36 0.56
    11 CSW01_02055 sodium:proton antiporter no 0.56
    12 CSW01_06570 serine transporter no 0.56
    13 CSW01_07175 DUF2987 domain-containing protein no 0.56
    14 CSW01_03760 phosphate regulon transcriptional regulatory protein PhoB 0.28 0.55
    15 CSW01_09590 competence protein ComEA no 0.55
    16 CSW01_05660 dethiobiotin synthase 0.23 0.55
    17 CSW01_00425 universal stress protein B no 0.54
    18 CSW01_17325 transaldolase 0.40 0.54
    19 CSW01_10255 cytochrome c-type biogenesis protein CcmH no 0.54
    20 CSW01_08105 type IV pilus biogenesis/stability protein PilW no 0.52

    Or look for negative cofitness