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  • Top cofit genes for CSW01_09635 from Vibrio cholerae E7946 ATCC 55056

    sigma-54-dependent Fis family transcriptional regulator
    SEED: Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03090 rRNA (cytidine-2'-O-)-methyltransferase 0.31 0.65
    2 CSW01_11345 uracil phosphoribosyltransferase no 0.63
    3 CSW01_07820 RidA family protein 0.18 0.63
    4 CSW01_11115 hypothetical protein no 0.62
    5 CSW01_08940 N-acetylmannosamine kinase no 0.61
    6 CSW01_09775 lytic murein transglycosylase no 0.61
    7 CSW01_05465 CPBP family intramembrane metalloprotease no 0.59
    8 CSW01_07980 NAD(P)-dependent oxidoreductase no 0.59
    9 CSW01_12040 DUF1499 domain-containing protein no 0.58
    10 CSW01_02860 sulfate ABC transporter permease subunit CysW 0.27 0.58
    11 CSW01_01025 LysE family translocator no 0.56
    12 CSW01_19095 DUF445 domain-containing protein no 0.55
    13 CSW01_14470 DUF134 domain-containing protein no 0.55
    14 CSW01_03255 ABC transporter permease no 0.55
    15 CSW01_00900 hypothetical protein no 0.54
    16 CSW01_13210 TIGR02444 family protein no 0.54
    17 CSW01_13625 C4-dicarboxylate ABC transporter no 0.54
    18 CSW01_02275 arginine:ornithine antiporter 0.45 0.54
    19 CSW01_06925 hypothetical protein no 0.54
    20 CSW01_17140 urease no 0.53

    Or look for negative cofitness