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  • Top cofit genes for CSW01_09595 from Vibrio cholerae E7946 ATCC 55056

    peptidylprolyl isomerase
    SEED: Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
    KEGG: peptidyl-prolyl cis-trans isomerase D

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11210 flagellar hook protein FlgE 0.73 0.74
    2 CSW01_11225 flagellar basal body rod protein FlgB 0.82 0.73
    3 CSW01_09005 regulator of ribonuclease activity A no 0.73
    4 CSW01_11195 flagellar L-ring protein 0.74 0.71
    5 CSW01_04575 flagellar motor protein PomA no 0.71
    6 CSW01_02150 MSHA biogenesis protein MshB no 0.71
    7 CSW01_09440 PilZ domain-containing protein no 0.70
    8 CSW01_11200 flagellar basal-body rod protein FlgG 0.86 0.70
    9 CSW01_13635 thiol:disulfide interchange protein DsbD 0.65 0.70
    10 CSW01_05130 flagellar protein MotY 0.56 0.70
    11 CSW01_09720 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD no 0.70
    12 CSW01_06735 methylisocitrate lyase 0.95 0.70
    13 CSW01_00470 twin-arginine translocase subunit TatC 0.77 0.69
    14 CSW01_02110 MSHA biogenesis protein MshJ no 0.69
    15 CSW01_02170 type II secretion system protein no 0.68
    16 CSW01_10675 flagellar protein FliS 0.76 0.68
    17 CSW01_02135 MSHA biogenesis protein MshE no 0.68
    18 CSW01_06385 peptidase 0.50 0.68
    19 CSW01_03210 iron ABC transporter permease 0.45 0.68
    20 CSW01_07025 hypothetical protein no 0.68

    Or look for negative cofitness