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  • Top cofit genes for CSW01_09325 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter
    SEED: Arginine/ornithine ABC transporter, permease protein AotQ
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14580 type VI secretion system lipoprotein TssJ no 0.59
    2 CSW01_17705 two-component sensor histidine kinase no 0.46
    3 CSW01_06225 cytidine deaminase no 0.46
    4 CSW01_17665 hypothetical protein no 0.46
    5 CSW01_07990 GGDEF domain-containing protein no 0.45
    6 CSW01_17540 sodium:solute symporter 0.36 0.44
    7 CSW01_06520 3'-5' exonuclease no 0.42
    8 CSW01_06270 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.54 0.42
    9 CSW01_18555 hypothetical protein no 0.41
    10 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.82 0.41
    11 CSW01_19060 MATE family efflux transporter no 0.41
    12 CSW01_00085 heat-shock protein Hsp20 0.36 0.41
    13 CSW01_16175 hypothetical protein no 0.40
    14 CSW01_08225 ATP-dependent helicase no 0.40
    15 CSW01_00475 cytochrome C biogenesis protein CcsA no 0.40
    16 CSW01_14275 HlyD family secretion protein no 0.40
    17 CSW01_06005 vancomycin high temperature exclusion protein 0.21 0.39
    18 CSW01_09030 MarR family transcriptional regulator no 0.39
    19 CSW01_19210 DUF3081 domain-containing protein no 0.39
    20 CSW01_08290 serine protease no 0.38

    Or look for negative cofitness