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  • Top cofit genes for CSW01_09320 from Vibrio cholerae E7946 ATCC 55056

    amino acid ABC transporter permease
    SEED: Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_08750 1-aminocyclopropane-1-carboxylate deaminase no 0.53
    2 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase no 0.52
    3 CSW01_13660 VUT family protein 0.28 0.48
    4 CSW01_06780 homogentisate 1,2-dioxygenase no 0.47
    5 CSW01_13610 membrane protein FxsA no 0.46
    6 CSW01_18020 DEAD/DEAH box helicase no 0.46
    7 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI 0.51 0.46
    8 CSW01_02420 glutaminase 0.33 0.46
    9 CSW01_10320 chemotaxis protein CheA 0.34 0.45
    10 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 0.56 0.45
    11 CSW01_10795 NAD(P)H:quinone oxidoreductase 0.21 0.45
    12 CSW01_09705 hypothetical protein no 0.45
    13 CSW01_06910 molecular chaperone DnaK no 0.45
    14 CSW01_19045 phosphoenolpyruvate synthase regulatory protein no 0.45
    15 CSW01_19235 glycogen debranching enzyme GlgX no 0.45
    16 CSW01_19565 ABC transporter substrate-binding protein 0.25 0.45
    17 CSW01_03255 ABC transporter permease no 0.44
    18 CSW01_01030 AraC family transcriptional regulator 0.37 0.44
    19 CSW01_11055 phage major capsid protein, P2 family 0.32 0.44
    20 CSW01_14215 DUF839 domain-containing protein no 0.44

    Or look for negative cofitness