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  • Top cofit genes for CSW01_09290 from Vibrio cholerae E7946 ATCC 55056

    ATP-dependent DNA helicase DinG
    SEED: ATP-dependent helicase DinG/Rad3
    KEGG: ATP-dependent DNA helicase DinG

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10480 histidine kinase no 0.55
    2 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.49 0.53
    3 CSW01_12270 prepilin-type cleavage/methylation domain-containing protein 0.27 0.50
    4 CSW01_10220 DNA topoisomerase III 0.55 0.49
    5 CSW01_04265 toxin coregulated pilin no 0.49
    6 CSW01_06780 homogentisate 1,2-dioxygenase no 0.48
    7 CSW01_14195 IclR family transcriptional regulator no 0.47
    8 CSW01_17090 SPOR domain-containing protein no 0.47
    9 CSW01_03530 sulfite exporter TauE/SafE family protein no 0.46
    10 CSW01_08915 ABC transporter permease no 0.45
    11 CSW01_06055 DUF3334 domain-containing protein no 0.45
    12 CSW01_15470 NAD(P)-dependent oxidoreductase 0.16 0.45
    13 CSW01_07155 spermidine/putrescine ABC transporter permease PotB 0.11 0.44
    14 CSW01_14420 peptidase M23 no 0.44
    15 CSW01_05920 dicarboxylate/amino acid:cation symporter 0.36 0.44
    16 CSW01_04520 aminobenzoyl-glutamate transporter no 0.43
    17 CSW01_02420 glutaminase no 0.43
    18 CSW01_06545 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.56 0.43
    19 CSW01_12995 lysine transporter LysM 0.57 0.43
    20 CSW01_06910 molecular chaperone DnaK no 0.42

    Or look for negative cofitness