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  • Top cofit genes for CSW01_09285 from Vibrio cholerae E7946 ATCC 55056

    porin
    SEED: Outer membrane protein OmpT
    KEGG: outer membrane protein OmpT

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18970 DUF2850 domain-containing protein no 0.60
    2 CSW01_06035 hypothetical protein no 0.59
    3 CSW01_12610 3-isopropylmalate dehydratase small subunit no 0.58
    4 CSW01_03505 hypothetical protein no 0.58
    5 CSW01_13670 DNA-directed RNA polymerase subunit omega no 0.57
    6 CSW01_12585 phosphatase PAP2 family protein no 0.57
    7 CSW01_14950 sodium:proton antiporter no 0.57
    8 CSW01_14245 hypothetical protein no 0.56
    9 CSW01_12575 transcriptional regulator LeuO no 0.56
    10 CSW01_10690 protein FlaG no 0.55
    11 CSW01_11185 flagellar assembly peptidoglycan hydrolase FlgJ no 0.55
    12 CSW01_14720 sigma-54-dependent Fis family transcriptional regulator no 0.55
    13 CSW01_08470 DUF2927 domain-containing protein no 0.55
    14 CSW01_05845 HDOD domain-containing protein no 0.55
    15 CSW01_05695 class I SAM-dependent methyltransferase no 0.54
    16 CSW01_01490 Fis family transcriptional regulator no 0.54
    17 CSW01_09755 cytochrome C no 0.54
    18 CSW01_03855 preprotein translocase subunit YajC no 0.54
    19 CSW01_07955 catalase no 0.54
    20 CSW01_12605 3-isopropylmalate dehydratase large subunit no 0.54

    Or look for negative cofitness