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  • Top cofit genes for CSW01_09115 from Vibrio cholerae E7946 ATCC 55056

    sigma-54-dependent Fis family transcriptional regulator
    SEED: Sigma-54 dependent transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06735 methylisocitrate lyase 0.35 0.82
    2 CSW01_09095 thiol-disulfide oxidoreductase DCC family protein no 0.80
    3 CSW01_11920 NupC/NupG family nucleoside CNT transporter 0.24 0.78
    4 CSW01_03210 iron ABC transporter permease no 0.77
    5 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB no 0.77
    6 CSW01_01485 transcriptional regulator no 0.76
    7 CSW01_10290 cytochrome c biogenesis ATP-binding export protein CcmA no 0.76
    8 CSW01_03030 cell division protein ZapE no 0.76
    9 CSW01_16835 catabolite repressor/activator no 0.76
    10 CSW01_09720 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD no 0.76
    11 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) no 0.76
    12 CSW01_02530 D-erythrose-4-phosphate dehydrogenase no 0.76
    13 CSW01_05730 inosine/guanosine kinase no 0.75
    14 CSW01_03215 ABC transporter ATP-binding protein no 0.75
    15 CSW01_01555 ATP-dependent RNA helicase RhlB no 0.75
    16 CSW01_06395 iron-regulated protein A no 0.75
    17 CSW01_10020 ROK family protein no 0.75
    18 CSW01_07135 chromosome partitioning protein ParA no 0.75
    19 CSW01_01490 Fis family transcriptional regulator no 0.74
    20 CSW01_13285 ribulose-phosphate 3-epimerase no 0.74

    Or look for negative cofitness