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  • Top cofit genes for CSW01_09100 from Vibrio cholerae E7946 ATCC 55056

    cryptochrome DASH
    SEED: Deoxyribodipyrimidine photolyase, single-strand-specific
    KEGG: deoxyribodipyrimidine photo-lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11780 exodeoxyribonuclease V subunit beta no 0.62
    2 CSW01_02005 hypothetical protein no 0.62
    3 CSW01_12320 3',5'-cyclic-AMP phosphodiesterase no 0.61
    4 CSW01_08495 hypothetical protein no 0.59
    5 CSW01_10300 chemotaxis protein CheW no 0.59
    6 CSW01_04495 hypothetical protein no 0.59
    7 CSW01_03755 recombination-associated protein RdgC 0.29 0.58
    8 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit no 0.58
    9 CSW01_09040 primosomal protein no 0.57
    10 CSW01_08975 phage tail tape measure protein no 0.56
    11 CSW01_00410 universal stress protein UspA no 0.56
    12 CSW01_06735 methylisocitrate lyase no 0.55
    13 CSW01_15045 hypothetical protein no 0.55
    14 CSW01_12605 3-isopropylmalate dehydratase large subunit no 0.55
    15 CSW01_09735 LysR family transcriptional regulator no 0.54
    16 CSW01_16940 LysR family transcriptional regulator no 0.54
    17 CSW01_05985 thioredoxin-disulfide reductase no 0.54
    18 CSW01_10010 hypothetical protein no 0.53
    19 CSW01_08480 manganese-dependent inorganic pyrophosphatase no 0.53
    20 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase no 0.53

    Or look for negative cofitness