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  • Top cofit genes for CSW01_08925 from Vibrio cholerae E7946 ATCC 55056

    sialic acid-binding protein
    SEED: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_16505 DUF645 domain-containing protein no 0.67
    2 CSW01_14560 type VI secretion system baseplate subunit TssE no 0.66
    3 CSW01_01355 UDP-glucose 4-epimerase no 0.65
    4 CSW01_08875 SAM-dependent DNA methyltransferase no 0.64
    5 CSW01_14470 DUF134 domain-containing protein no 0.64
    6 CSW01_16240 hypothetical protein no 0.63
    7 CSW01_19350 sulfite exporter TauE/SafE family protein no 0.63
    8 CSW01_14435 MFS transporter no 0.63
    9 CSW01_02820 5'-nucleotidase SurE 0.28 0.62
    10 CSW01_04265 toxin coregulated pilin no 0.62
    11 CSW01_09135 PTS fructose transporter subunit IIA no 0.62
    12 CSW01_14465 EamA/RhaT family transporter 0.33 0.61
    13 CSW01_07075 MFS transporter 0.41 0.61
    14 CSW01_09120 aldehyde dehydrogenase no 0.61
    15 CSW01_09535 alanine dehydrogenase 0.30 0.61
    16 CSW01_11825 zinc transporter ZntB no 0.60
    17 CSW01_06725 tripartite tricarboxylate transporter substrate-binding protein 0.32 0.60
    18 CSW01_06715 tripartite tricarboxylate transporter permease no 0.60
    19 CSW01_01380 D-2-hydroxyacid dehydrogenase no 0.59
    20 CSW01_14165 fucose 4-O-acetylase no 0.59

    Or look for negative cofitness