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  • Top cofit genes for CSW01_08920 from Vibrio cholerae E7946 ATCC 55056

    C4-dicarboxylate ABC transporter permease
    SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_15000 rfbP protein no 0.70
    2 CSW01_14125 1,4-alpha-glucan branching enzyme no 0.69
    3 CSW01_08615 Lrp/AsnC family transcriptional regulator no 0.68
    4 CSW01_06090 formimidoylglutamase no 0.66
    5 CSW01_02835 RNA polymerase sigma factor RpoS no 0.66
    6 CSW01_18400 outer membrane lipoprotein-sorting protein no 0.65
    7 CSW01_07075 MFS transporter no 0.65
    8 CSW01_17760 DNA helicase IV 0.54 0.64
    9 CSW01_11300 copper-exporting P-type ATPase A no 0.64
    10 CSW01_03095 hypothetical protein no 0.64
    11 CSW01_09970 peptide-methionine (R)-S-oxide reductase no 0.63
    12 CSW01_05180 tRNA-Asn no 0.63
    13 CSW01_12360 TIGR00153 family protein no 0.63
    14 CSW01_01315 NAD-dependent alcohol dehydrogenase no 0.63
    15 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD no 0.63
    16 CSW01_01325 acetyltransferase no 0.63
    17 CSW01_19325 MltR family transcriptional regulator no 0.62
    18 CSW01_04020 vibriobactin biosynthesis amide synthase VibH no 0.62
    19 CSW01_01320 acyl-CoA reductase no 0.62
    20 CSW01_01275 phosphomannomutase/phosphoglucomutase 0.57 0.62

    Or look for negative cofitness